DISC 1
- Audio Commentary for Episode 6x03 by Chris Carter
- Cast Credits for Each of the 4 Episodes on Disc

DISC 2
- Cast Credits for Each of the 4 Episodes on Disc

DISC 3
- Three Deleted Scenes from Ep.6x10
- Two Deleted Scenes from Ep.6x11
- Two Deleted Scenes from Ep.6x12
- Cast Credits for Each of the 4 Episodes on Disc

DISC 4
- One Deleted Scene from Ep.6x15
- International Clips: 4 Clips from Ep. 6x15
- Alternate Ending from Ep.6x16
- Cast Credits for Each of the 4 Episodes on Disc

DISC 5
- Audio Commentary for Episode 6x18 by Kim Manners
- One Deleted Scene from Ep.6x18 : 시즌 6 에피소드 18 ˝Milagro˝의 삭제 장면
- One Alternate Scene & Two Deleted Scene from Ep.6x19
- International Clips: 4 Clips from Ep. 6x20
- Cast Credits for Each of the 4 Episodes on Disc

DISC 6
- One Deleted Scene from Ep.6x22
- Cast Credits for Each of the 4 Episodes on Disc
- Documentary: The Truth about Season 6
- Featurette on Season 6
- Promo Spots

EPISODES

DISC 1
1) The Beginning
2) Drive
3) Triangle
4) Dreamland

DISC 2
5) Dreamland part Ⅱ
6) How the Ghosts Stole Christmas
7) Terms of Endearment
8) The Rain King

DISC 3
9) S.R. 819
10) Tithonus
11) Two Fathers
12) One Son

DISC 4
13) Agua Mala
14) Monday
15) Arcadia
16) Alpha

DISC 5
17) Trevor
18) Milagro
19) The Unnatural
20) Three of a Kind

DISC 6
21) Field Trip
22) Biogenesis